Commit 5e0c04d2840332d9d2d850f99bfae4e38b645a60
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bb9de130
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FIX: separation of pieces to surface_process wasn't working in mac
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8 additions
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invesalius/data/surface.py
@@ -447,13 +447,13 @@ class SurfaceManager(): | @@ -447,13 +447,13 @@ class SurfaceManager(): | ||
447 | else: | 447 | else: |
448 | flip_image = True | 448 | flip_image = True |
449 | 449 | ||
450 | - n_processors = 1 # multiprocessing.cpu_count() | 450 | + n_processors = multiprocessing.cpu_count() |
451 | 451 | ||
452 | pipe_in, pipe_out = multiprocessing.Pipe() | 452 | pipe_in, pipe_out = multiprocessing.Pipe() |
453 | - o_piece = 2 | 453 | + o_piece = 1 |
454 | piece_size = 40 | 454 | piece_size = 40 |
455 | 455 | ||
456 | - n_pieces = round(mask.matrix.shape[0] / piece_size + 0.5, 0) | 456 | + n_pieces = int(round(mask.matrix.shape[0] / piece_size + 0.5, 0)) |
457 | print "n_pieces", n_pieces, mask.matrix.shape | 457 | print "n_pieces", n_pieces, mask.matrix.shape |
458 | 458 | ||
459 | q_in = multiprocessing.Queue() | 459 | q_in = multiprocessing.Queue() |
@@ -494,16 +494,13 @@ class SurfaceManager(): | @@ -494,16 +494,13 @@ class SurfaceManager(): | ||
494 | 494 | ||
495 | polydata = polydata_append.GetOutput() | 495 | polydata = polydata_append.GetOutput() |
496 | 496 | ||
497 | - # Orient normals from inside to outside | ||
498 | - normals = vtk.vtkPolyDataNormals() | ||
499 | - normals.SetInput(polydata) | ||
500 | - normals.SetFeatureAngle(80) | ||
501 | - normals.AutoOrientNormalsOn() | ||
502 | - normals.GetOutput().ReleaseDataFlagOn() | 497 | + clean = vtk.vtkCleanPolyData() |
498 | + clean.SetInput(polydata) | ||
499 | + clean.PointMergingOn() | ||
503 | 500 | ||
504 | - # Improve performance | 501 | + # Improve performance |
505 | stripper = vtk.vtkStripper() | 502 | stripper = vtk.vtkStripper() |
506 | - stripper.SetInput(normals.GetOutput()) | 503 | + stripper.SetInput(clean.GetOutput()) |
507 | stripper.PassThroughCellIdsOn() | 504 | stripper.PassThroughCellIdsOn() |
508 | stripper.PassThroughPointIdsOn() | 505 | stripper.PassThroughPointIdsOn() |
509 | 506 |