23 Mar, 2020
4 commits
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…er try to use brain segmenter tool
21 Mar, 2020
2 commits
20 Mar, 2020
6 commits
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Add a function to segment brain in InVesalius. It uses a neural network based on U-Net implemented using Keras. For default it will use Plaidml as backend, but it's possible to set other backend using the GUI.
16 Mar, 2020
1 commit
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* creating plugins folder and add menu * added header to inv_paths * Adding plugin into menu * Added pubsub to call a plugin * starting to calling plugin * importing plugin module * improvements * starting to calling plugin main * Adding plugin style into style_level and slice_styles * Created methods to discard cache nd get slice and actual mask * added option to discard vtk cache from slice and mask * added method to create project from a matrix * show close project dialong when creating a new project from array * replace scipy.misc with imageio * enabling and disabling plugin menu items when open and close a project * using default ww&wl from previous project if available * Starting to create a base editor style * Created a base editor style interactor to ease the creation o segmentation that need to select voxels by a brush * calling methods before and after click, move and release in the BaseImageEdtionInteractorStyle * improvements * improvements * merging with master * Created a method to load project from folder * Created a method to save a project inside a folder * Importing invesalius project folder * Starting new invesalius instance * Showing error when not able to launch new invesalius instance * calling correctly new invesalius instance * improvements
17 Feb, 2020
1 commit
20 Jan, 2020
1 commit
20 Dec, 2019
2 commits
18 Nov, 2019
1 commit
22 Oct, 2019
1 commit
21 Oct, 2019
1 commit
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* Importing just one bitmap slice * Importing just one dicom slice
09 Oct, 2019
2 commits
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and reducing the warning and debug messages from gdcm
27 Aug, 2019
1 commit
14 Aug, 2019
1 commit
24 Jun, 2019
3 commits
19 Jun, 2019
2 commits
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* Trigger improves * better errors messages for polhemus
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* generating thumbs only using gdcm + numpy * applying intercept slop * generating thumbnails and slices without vtkgdcmreader * Using numpy and gdcm in dicom_preview_panel * loading multiframe dicom * working with rgb dicoms * little improvements * removed all vtkgdcm importing * getting spacing from gdcmimagereader
17 Jun, 2019
1 commit
14 Jun, 2019
1 commit
12 Jun, 2019
2 commits
11 Jun, 2019
2 commits
10 Jun, 2019
1 commit
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* ENH:Update GUI navigation defaults for better workflow * ENH: Improved visualization in navigation - Larger distance text in target interface - Better colors for coil objects and aim - Update defaults in navigation tab * ENH: Save last used NDI markers filenames to config.json
07 Jun, 2019
2 commits
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* Added Camera tracker -improved tracker.py by using const.py * Added tracker file * Tooltip offset * Remove set button from navigation tab * Reduce panel size and cleaning * More cleaning * Updates to code standards * Support to the fourth FTsensor * Support coil's marker * Update to Pose board instead single marker * Minor testing * Support to NDI polaris * invesalius sets ROMs path * dialog to select COM port * dialog to select COM port for polhemus devices * Sensors ID * cleaning wrapper export coordinates * Polaris support working with Visor2 tools and dynamic coregistration * dialog to choose roms files * wrapper texts improvements * improv coils arrows scale * dialog to select COM for polhemus * inv_path upgrade * Removed camera_tracker
23 May, 2019
1 commit
26 Apr, 2019
1 commit