invesalius / invesalius3

12 Oct, 2021

2 commits

c944ccf5 Using get_LUT_value from imagedata_utils in styles.py Browse Code »

Thiago Franco de Moraes
2021-10-12 19:21:10 -0300
7c2bd0b8 Using get_LUT_value from imagedata_utils in brain segmentation Browse Code »

Thiago Franco de Moraes
2021-10-12 19:18:40 -0300

11 Oct, 2021

2 commits

2a9da902 Merge pull request #376 from okahilak/add-script-for-sending-events-to-invesalius ... Browse Code »
```
ADD: Script for sending events to InVesalius via Socket.IO
```
Victor Hugo Souza
2021-10-11 08:40:33 +0300
310b5d08 Merge pull request #375 from okahilak/allow-selecting-baud-rate-for-serial-port ... Browse Code »
```
MOD: Allow selecting baud rate for serial port communication
```
Victor Hugo Souza
2021-10-11 08:38:15 +0300

08 Oct, 2021

5 commits

a406f61e Add pytorch backend to brain segmentation (#365) ... Browse Code »

* added pytorch to requirements.txt and showing in GUI

* segmenting using pytorch

* Remove debug prints

* Added an function to download a file and save it localy

* Downloading the weight using the developed function to download file

2021-10-08 16:16:53 -0300

65d1a237 Review comment: Move added requirements to optional-requirements.txt Browse Code »

Olli-Pekka Kahilakoski
2021-10-08 17:46:58 +0300
eb4c656f Review comment: Use non-configurable baud rate for serial port for now ... Browse Code »
```
However, ensure that the configurable baud rate can be implemented back
easily if needed (namely, by reverting this commit).
```
Olli-Pekka Kahilakoski
2021-10-08 17:39:54 +0300
a07dc035 ADD: Script for sending events to InVesalius via Socket.IO Browse Code »

Olli-Pekka Kahilakoski
2021-10-08 13:56:10 +0300

5acf7461 MOD: Allow selecting baud rate for serial port communication ... Browse Code »

Other changes:

- Disallow not selecting COM port in COM port selection dialog by
  defaulting to the first COM port in the list. Previously, it was
  possible to pass an empty string as the COM port by not making
  the selection.

- When the "Serial port" checkbox is pressed and the user presses
  "Cancel" in the dialog that is opened, uncheck the "Serial port" checkbox
  instead of keeping it checked.

- Be explicit about if the serial port is in use or not, instead of inferring
  it from the COM port variable being set or not.

- Pass the serial port parameters (COM port, baud rate) directly to the
  Navigation class, instead of passing them through NeuronavigationPanel.

- Minor improvements to style and naming of the variables.

2021-10-08 12:35:07 +0300

07 Oct, 2021

8 commits

9460b9cd Added very basic support for sessions (#374) ... Browse Code »
```
Markers code made more robust
Minor fixes
UI for sessions is quite messy, needs polishing
```
Andrey Zhdanov
2021-10-07 23:13:05 -0300
db6e8b0d Merge pull request #373 from okahilak/fix-stop-navigation-when-serial-port-connection-is-none ... Browse Code »
```
FIX: StopNavigation function when serial port connection has not been formed
```
Victor Hugo Souza
2021-10-07 18:04:44 +0300

aa4f4cad FIX: StopNavigation function when serial port connection has not been formed ... Browse Code »

StopNavigation function is called, e.g., when InVesalius is quitted. If the
serial port was enabled in the UI but navigation had not been started, it
previously caused an error because serial_port_connection variable was None.

2021-10-07 17:04:32 +0300

4f539b46 Merge pull request #372 from okahilak/fix-using-pedal-for-setting-fiducials ... Browse Code »
```
FIX: Using pedal for setting fiducials
```
Victor Hugo Souza
2021-10-07 16:09:44 +0300
3e89c5ce Review comment: Remove printing to console when pedal state changes Browse Code »

Olli-Pekka Kahilakoski
2021-10-07 14:45:04 +0300
490d87a8 Merge pull request #369 from rmatsuda/Thread-for-coordinates ... Browse Code »
```
Creation of a new thread for coordinates acquisition
```
Victor Hugo Souza
2021-10-07 11:56:00 +0300

8a14b309 FIX: Using pedal for setting fiducials ... Browse Code »

Previously, the callback for setting the fiducial was removed while
executing the callback. However, that did not work because it made
the list of callbacks that PedalConnection looped over change on the
fly. Instead, use 'remove when released' option for callbacks to
automatically remove the callback when the pedal is released.

2021-10-07 11:51:12 +0300