invesalius / invesalius3

07 Oct, 2021

7 commits

db6e8b0d Merge pull request #373 from okahilak/fix-stop-navigation-when-serial-port-connection-is-none ... Browse Code »
```
FIX: StopNavigation function when serial port connection has not been formed
```
Victor Hugo Souza
2021-10-07 18:04:44 +0300

aa4f4cad FIX: StopNavigation function when serial port connection has not been formed ... Browse Code »

StopNavigation function is called, e.g., when InVesalius is quitted. If the
serial port was enabled in the UI but navigation had not been started, it
previously caused an error because serial_port_connection variable was None.

2021-10-07 17:04:32 +0300

4f539b46 Merge pull request #372 from okahilak/fix-using-pedal-for-setting-fiducials ... Browse Code »
```
FIX: Using pedal for setting fiducials
```
Victor Hugo Souza
2021-10-07 16:09:44 +0300
3e89c5ce Review comment: Remove printing to console when pedal state changes Browse Code »

Olli-Pekka Kahilakoski
2021-10-07 14:45:04 +0300
490d87a8 Merge pull request #369 from rmatsuda/Thread-for-coordinates ... Browse Code »
```
Creation of a new thread for coordinates acquisition
```
Victor Hugo Souza
2021-10-07 11:56:00 +0300

8a14b309 FIX: Using pedal for setting fiducials ... Browse Code »

Previously, the callback for setting the fiducial was removed while
executing the callback. However, that did not work because it made
the list of callbacks that PedalConnection looped over change on the
fly. Instead, use 'remove when released' option for callbacks to
automatically remove the callback when the pedal is released.

2021-10-07 11:51:12 +0300

b966468a MOD: Support 'remove when released' option in pedal callbacks ... Browse Code »
```
Also, send 'Pedal state changed' events regardless of if any callbacks
have been registered or not.
```
Olli-Pekka Kahilakoski
2021-10-07 11:40:30 +0300

06 Oct, 2021

8 commits

0b8581bf FIX: Sensor ID inside set coordinates ... Browse Code »
```
-change coilID to objID
```
Renan
2021-10-06 14:23:13 +0300
dd8b84f9 Merge pull request #371 from okahilak/additional-fix-for-registering-tracker-location-using-pedal ... Browse Code »
```
FIX: Additional bug in registering tracker location using pedal
```
Victor Hugo Souza
2021-10-06 14:03:24 +0300
b9c4f1cf FIX: Additional bug in registering tracker location using pedal Browse Code »

Olli-Pekka Kahilakoski
2021-10-06 14:01:16 +0300
a4e8b13a Merge pull request #370 from okahilak/fix-registering-tracker-location-using-pedal ... Browse Code »
```
FIX: Registering tracker location using pedal in calibration
```
Victor Hugo Souza
2021-10-06 13:57:54 +0300
356cada5 FIX: Registering tracker location using pedal in calibration Browse Code »

Olli-Pekka Kahilakoski
2021-10-06 13:55:33 +0300
278fb9b3 FIX: stop thread when tracker is disconnected Browse Code »

Renan
2021-10-06 10:39:38 +0300
8acbc267 FIX: minor standardization Browse Code »

Renan
2021-10-06 09:56:19 +0300
1ba56fa2 FIX: ICP get coordinates Browse Code »

Renan
2021-10-06 09:44:43 +0300

05 Oct, 2021

2 commits

85f1368a ADD thread Browse Code »

Renan
2021-10-05 22:47:49 +0300
53accd20 Merge pull request #367 from andreyzhd/markers-list-improvements ... Browse Code »
```
Marker code refactoring
```
Victor Hugo Souza
2021-10-05 09:32:21 +0300

04 Oct, 2021

2 commits

2560d18f Merge branch 'master' into markers-list-improvements Browse Code »

Victor Hugo Souza
2021-10-04 12:15:34 +0300
ac47aa77 - Added new class for storing markers ... Browse Code »
```
- General marker code cleanup
- Marker's label decoupled from the target status
```
Andrey Zhdanov
2021-10-04 00:36:54 +0300

30 Sep, 2021

3 commits

574c9620 Merge pull request #366 from rmatsuda/minor_FIX_markers_colors ... Browse Code »
```
FIX: change marker colors
```
Victor Hugo Souza
2021-09-30 15:35:58 +0300
ca212a82 FIX: SetNewColor Browse Code »

Renan
2021-09-30 15:05:39 +0300
97f76e21 FIX: change marker colors ... Browse Code »
```
-minor: set size to trackers combobox
```
Renan
2021-09-30 14:46:24 +0300

29 Sep, 2021

1 commit

23bc2c04 Markers code cleanup (#364) ... Browse Code »
```
* Removed the legacy (.mks) marker loading code.

* minor cleanup
```
Andrey Zhdanov
2021-09-29 13:51:28 -0300

27 Sep, 2021

6 commits

5edcfb7d updated ignore Browse Code »

Thiago Franco de Moraes
2021-09-27 15:46:05 -0300
9bbd209d Merge remote-tracking branch 'upstream/master' Browse Code »

Thiago Franco de Moraes
2021-09-27 15:43:41 -0300
621c80bc ignoring .idea folder (closes #360) Browse Code »

Thiago Franco de Moraes
2021-09-27 15:41:27 -0300
265cab23 Merge pull request #347 from okahilak/export-world-coordinates-into-marker-file ... Browse Code »
```
MOD: Export world coordinates into marker file
```
Victor Hugo Souza
2021-09-27 14:51:39 +0300
b2c66ba7 FIX: Invert affine for converting to the world space system Browse Code »

Victor Hugo Souza
2021-09-27 14:51:03 +0300
50563675 FIX: Replace marker_id by label_id on CreateMarker event Browse Code »

Victor Hugo Souza
2021-09-27 09:28:10 +0300

24 Sep, 2021

1 commit

af27358d Merge branch 'master' into export-world-coordinates-into-marker-file Browse Code »

okahilak
2021-09-24 18:32:16 +0300

23 Sep, 2021

3 commits

58d46d18 Cleanup of the markers code (#358) Browse Code »

Andrey Zhdanov
2021-09-23 13:52:47 -0300
96989be9 CLP: Move ICP class to its own file (icp.py) (#356) ... Browse Code »
```
* CLP: Move ICP class to its own file (icp.py)

* CLP: Remove unused imports from task_navigator.py
```
okahilak
2021-09-23 11:44:45 -0300
75b09af5 Updated gitignore Browse Code »

Thiago Franco de Moraes
2021-09-23 11:42:26 -0300

22 Sep, 2021

2 commits

a7d7f37f Updated gitignore Browse Code »

Thiago Franco de Moraes
2021-09-22 21:14:15 -0300
fde18433 Updated gitignore to ignore VSCode project setting files (#357) ... Browse Code »
```
* Updated gitignore to ignore VSCode project setting files

* minor fix
```
Andrey Zhdanov
2021-09-22 21:02:20 -0300

21 Sep, 2021

3 commits

29ce17eb MOD: Allow setting object fiducials using pedal (#355) ... Browse Code »

* Add OBJECT_FIDUCIALS dict to constants.py, replacing BTNS_OBJ
  and TIPS_OBJ, and facilitating cleaning up the code.

* Pass PedalConnection object to ObjectCalibrationDialog so that
  the pedal can be used for object calibration.

* Copy and slightly adapt the code that was used to set tracker
  fiducials using pedal (in OnTrackerFiducials in NeuronavigationPanel
  class) to do the same for object fiducials. Mark code duplication with
  TODO comment for later clean-up.

* Rename a function (OnGetObjectFiducials -> OnObjectFiducialButton),
  and rename a few variables (e.g., btn_id -> fiducial_index).

2021-09-21 18:14:18 -0300

c5fe4f20 CLP: Move Tracker class to its own file (tracker.py) (#354) Browse Code »

okahilak
2021-09-21 18:13:35 -0300

9ed8efe8 FIX: Bug in setting tracker fiducials (#352) ... Browse Code »

Namely, do not attempt to add or remove pedal callbacks if the
PedalConnection object is not available (e.g., due to missing
Python MIDI libraries).

2021-09-21 18:13:12 -0300

20 Sep, 2021

1 commit

22ce2dcf CLP: Move Navigation class to its own file (navigation.py) (#351) ... Browse Code »

* CLP: Move Navigation class to its own file (navigation.py)

* Also move the classes that Navigation class exclusively uses
  (namely, QueueCustom and UpdateNavigationScene) to the same file.

* Review comment: Change neuronavigation subdirectory to navigation

2021-09-20 16:37:18 -0300

16 Sep, 2021

1 commit

c4a14aa3 Handling 1bit pixel dicom images Browse Code »

Thiago Franco de Moraes
2021-09-16 19:29:45 -0300