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Commit 828f2a219e0bc1af8207cea0b131d22342f5f6db

Authored by Thiago Franco de Moraes
1 parent ef638c1f
Exists in master and in 10 other branches canvas_text, command-line, manual_v3.1, phoenix, remove_local_wxpython, rmatsuda-fix_ref_MTC, rmatsuda-fix_remove_marker_bug, rmatsuda-trigger_bug_fix, user_guide_en, xmartlabs-command-line

Coronal stacking was incorrect

Showing 2 changed files with 4 additions and 4 deletions   Show diff stats
invesalius/data/imagedata_utils.py
  Diff comments   View file @828f2a2
... ... @@ -574,7 +574,7 @@ def dcm2memmap(files, slice_size, orientation, resolution_percentage):
574 574 array = numpy_support.vtk_to_numpy(image.GetPointData().GetScalars())
575 575 if orientation == 'CORONAL':
576 576 array.shape = matrix.shape[0], matrix.shape[2]
577   - matrix[:, n, :] = array
  577 + matrix[:, shape[1] - n - 1, :] = array
578 578 elif orientation == 'SAGITTAL':
579 579 array.shape = matrix.shape[0], matrix.shape[1]
580 580 # TODO: Verify if it's necessary to add the slices swapped only in
... ... @@ -643,4 +643,4 @@ def imgnormalize(data, srange=(0, 255)):
643 643 datan = numpy.reshape(datan, dataf.shape)
644 644 datan = datan.astype(numpy.int16)
645 645  
646   - return datan
647 646 \ No newline at end of file
  647 + return datan
... ...
invesalius/data/viewer_slice.py
  Diff comments   View file @828f2a2
... ... @@ -1534,8 +1534,8 @@ class Viewer(wx.Panel):
1534 1534 orig_orien = proj.original_orientation
1535 1535  
1536 1536 self.cam.SetFocalPoint(0, 0, 0)
1537   - self.cam.SetViewUp(const.SLICE_POSITION[orig_orien][0][self.orientation])
1538   - self.cam.SetPosition(const.SLICE_POSITION[orig_orien][1][self.orientation])
  1537 + self.cam.SetViewUp(const.SLICE_POSITION[const.AXIAL][0][self.orientation])
  1538 + self.cam.SetPosition(const.SLICE_POSITION[const.AXIAL][1][self.orientation])
1539 1539 #self.cam.ComputeViewPlaneNormal()
1540 1540 #self.cam.OrthogonalizeViewUp()
1541 1541 self.cam.ParallelProjectionOn()
... ...