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Commit 944cdd7eb0da2cada6bc85691b804ee12c8a1801

Authored by Paulo Henrique Junqueira Amorim
1 parent f4e362c5
Exists in master and in 68 other branches 3d_inter_style, MIPs, beta3, beta4, brush_pix, canvas_reeng, canvas_text, casmoothing_cython, clean, command-line, cython_threshold, debian_cython, editor_improvements, encoding, ff_mask, ff_mask_improv, ffill_gui, ffill_segmentation, fill_holes_auto, fixes_pre_beta5, floodfill, get_pixel, import_mesh, interactor_style, inv3.0.1, invesalius-libift, mactoolbar, mactoolbar_bkp, manual_v3.1, mask_boolean_op, mask_boolean_op_bkp, mask_copy, mask_greatest_component, measure, measure_canvas, measure_improvements, measure_placement_test, measure_spacing, orientation, phoenix, region_growing_confidence, remote, remove_local_wxpython, rmatsuda-fix_ref_MTC, rmatsuda-fix_remove_marker_bug, rmatsuda-trigger_bug_fix, rotvol, segmentation_menu, select_part, smoothing_bin, smoothing_bin_pll, surface_area, threshold_history, user_guide_en, usp-navegador, vti, vtk6, watershed, watershed_improvements, watershed_improvements_bkp, watershed_merge, workdir, wwwlgui, wx2.9_mac, wxgtk3, wxgtk3_b5, wxgtk3_bkp, xmartlabs-command-line

FIX: Error edited mask with project salved

Showing 4 changed files with 59 additions and 19 deletions   Show diff stats
invesalius/control.py
  Diff comments   View file @944cdd7
@@ -45,7 +45,7 @@ class Controller(): @@ -45,7 +45,7 @@ class Controller():
45 self.frame = frame 45 self.frame = frame
46 self.progress_dialog = None 46 self.progress_dialog = None
47 self.cancel_import = False 47 self.cancel_import = False
48 - 48 +
49 49
50 def __bind_events(self): 50 def __bind_events(self):
51 ps.Publisher().subscribe(self.OnImportMedicalImages, 'Import directory') 51 ps.Publisher().subscribe(self.OnImportMedicalImages, 'Import directory')
@@ -257,20 +257,30 @@ class Controller(): @@ -257,20 +257,30 @@ class Controller():
257 plistlib.writePlist(preset, preset_dir) 257 plistlib.writePlist(preset, preset_dir)
258 258
259 def OnSaveProject(self, pubsub_evt): 259 def OnSaveProject(self, pubsub_evt):
260 - filename = prj.Project().name  
261 - filename = filename.replace(' ','')  
262 - dir_ = tempfile.mkdtemp(filename) 260 +
  261 + if not(pubsub_evt.data):
  262 + filename = prj.Project().path
  263 + else:
  264 + filename = pubsub_evt.data
  265 + dir_,filename = os.path.split(filename)
  266 +
  267 + if not (filename):
  268 + filename = prj.Project().name
  269 + else:
  270 + filename = filename.replace(' ','_')
  271 + prj.Project().name = filename
  272 + prj.Project().path = filename
263 prj.Project().SavePlistProject(dir_, filename) 273 prj.Project().SavePlistProject(dir_, filename)
264 274
265 def OnOpenProject(self, pubsub_evt): 275 def OnOpenProject(self, pubsub_evt):
266 filename = os.path.abspath(pubsub_evt.data) 276 filename = os.path.abspath(pubsub_evt.data)
267 277
268 - print filename  
269 278
270 proj = prj.Project() 279 proj = prj.Project()
271 proj.OpenPlistProject(filename) 280 proj.OpenPlistProject(filename)
272 proj.SetAcquisitionModality(proj.modality) 281 proj.SetAcquisitionModality(proj.modality)
273 - 282 + proj.save_as = False
  283 + proj.path = filename
274 const.THRESHOLD_OUTVALUE = proj.threshold_range[0] 284 const.THRESHOLD_OUTVALUE = proj.threshold_range[0]
275 const.THRESHOLD_INVALUE = proj.threshold_range[1] 285 const.THRESHOLD_INVALUE = proj.threshold_range[1]
276 const.WINDOW_LEVEL['Default'] = (proj.window, proj.level) 286 const.WINDOW_LEVEL['Default'] = (proj.window, proj.level)
invesalius/data/slice_.py
  Diff comments   View file @944cdd7
@@ -559,8 +559,7 @@ class Slice(object): @@ -559,8 +559,7 @@ class Slice(object):
559 # threshold pipeline 559 # threshold pipeline
560 current_mask.imagedata.DeepCopy(mask_thresh_imagedata) 560 current_mask.imagedata.DeepCopy(mask_thresh_imagedata)
561 else: 561 else:
562 - mask_thresh_imagedata = vtk.vtkImageData()  
563 - mask_thresh_imagedata.DeepCopy(self.current_mask.imagedata) 562 + mask_thresh_imagedata = self.current_mask.imagedata
564 563
565 # map the input image through a lookup table 564 # map the input image through a lookup table
566 img_colours_mask = vtk.vtkImageMapToColors() 565 img_colours_mask = vtk.vtkImageMapToColors()
invesalius/gui/frame.py
  Diff comments   View file @944cdd7
@@ -29,6 +29,7 @@ import constants as const @@ -29,6 +29,7 @@ import constants as const
29 import default_tasks as tasks 29 import default_tasks as tasks
30 import default_viewers as viewers 30 import default_viewers as viewers
31 import import_panel as imp 31 import import_panel as imp
  32 +from project import Project
32 33
33 # Object toolbar 34 # Object toolbar
34 OBJ_TOOLS = [ID_ZOOM, ID_ZOOM_SELECT, ID_ROTATE, ID_MOVE, 35 OBJ_TOOLS = [ID_ZOOM, ID_ZOOM_SELECT, ID_ROTATE, ID_MOVE,
@@ -370,6 +371,9 @@ class ProjectToolBar(wx.ToolBar): @@ -370,6 +371,9 @@ class ProjectToolBar(wx.ToolBar):
370 371
371 self.__init_items() 372 self.__init_items()
372 self.__bind_events() 373 self.__bind_events()
  374 +
  375 + #FIXME:
  376 + self.save_as = True
373 377
374 def __init_items(self): 378 def __init_items(self):
375 379
@@ -438,8 +442,29 @@ class ProjectToolBar(wx.ToolBar): @@ -438,8 +442,29 @@ class ProjectToolBar(wx.ToolBar):
438 self.Bind(wx.EVT_TOOL, self.OnToolSave, id=const.ID_FILE_SAVE) 442 self.Bind(wx.EVT_TOOL, self.OnToolSave, id=const.ID_FILE_SAVE)
439 443
440 def OnToolSave(self, evt): 444 def OnToolSave(self, evt):
441 - print "Saving ..."  
442 - ps.Publisher().sendMessage('Save Project') 445 + filename = None
  446 + project_name = (Project().name).replace(' ','_')
  447 +
  448 + if Project().save_as:
  449 + dlg = wx.FileDialog(None,
  450 + "Save InVesalius project as...", # title
  451 + "", # last used directory
  452 + project_name, # filename
  453 + "InVesalius project (*.inv3)|*.inv3",
  454 + wx.SAVE|wx.OVERWRITE_PROMPT)
  455 + dlg.SetFilterIndex(0) # default is VTI
  456 +
  457 + if dlg.ShowModal() == wx.ID_OK:
  458 + filename = dlg.GetPath()
  459 + print "filename", filename
  460 + extension = "inv3"
  461 + if sys.platform != 'win32':
  462 + if filename.split(".")[-1] != extension:
  463 + filename = filename + "."+ extension
  464 +
  465 + Project().save_as = False
  466 +
  467 + ps.Publisher().sendMessage('Save Project',filename)
443 # ------------------------------------------------------------------ 468 # ------------------------------------------------------------------
444 469
445 class ObjectToolBar(wx.ToolBar): 470 class ObjectToolBar(wx.ToolBar):
invesalius/project.py
  Diff comments   View file @944cdd7
@@ -107,7 +107,9 @@ class Project(object): @@ -107,7 +107,9 @@ class Project(object):
107 107
108 self.invesalius_version = version.get_svn_revision() 108 self.invesalius_version = version.get_svn_revision()
109 print self.invesalius_version 109 print self.invesalius_version
110 - 110 +
  111 + self.save_as = True
  112 + self.path = ""
111 self.debug = 0 113 self.debug = 0
112 114
113 ####### MASK OPERATIONS 115 ####### MASK OPERATIONS
@@ -146,38 +148,42 @@ class Project(object): @@ -146,38 +148,42 @@ class Project(object):
146 ps.Publisher.sendMessage('Set raycasting preset', preset) 148 ps.Publisher.sendMessage('Set raycasting preset', preset)
147 149
148 def SavePlistProject(self, dir_, filename): 150 def SavePlistProject(self, dir_, filename):
149 - filename = os.path.join(dir_, filename) 151 +
  152 + dir_temp = tempfile.mkdtemp(filename)
  153 + filename_tmp = os.path.join(dir_temp, filename)
150 154
151 project = {} 155 project = {}
152 156
153 for key in self.__dict__: 157 for key in self.__dict__:
154 if getattr(self.__dict__[key], 'SavePlist', None): 158 if getattr(self.__dict__[key], 'SavePlist', None):
155 - project[key] = {'#plist': self.__dict__[key].SavePlist(filename)} 159 + project[key] = {'#plist': self.__dict__[key].SavePlist(filename_tmp)}
156 else: 160 else:
157 project[key] = self.__dict__[key] 161 project[key] = self.__dict__[key]
158 162
159 masks = {} 163 masks = {}
160 for index in self.mask_dict: 164 for index in self.mask_dict:
161 masks[str(index)] = {'#mask':\ 165 masks[str(index)] = {'#mask':\
162 - self.mask_dict[index].SavePlist(filename)} 166 + self.mask_dict[index].SavePlist(filename_tmp)}
163 print index 167 print index
164 168
165 surfaces = {} 169 surfaces = {}
166 for index in self.surface_dict: 170 for index in self.surface_dict:
167 surfaces[str(index)] = {'#surface':\ 171 surfaces[str(index)] = {'#surface':\
168 - self.surface_dict[index].SavePlist(filename)} 172 + self.surface_dict[index].SavePlist(filename_tmp)}
169 print index 173 print index
170 174
171 project['surface_dict'] = surfaces 175 project['surface_dict'] = surfaces
172 project['mask_dict'] = masks 176 project['mask_dict'] = masks
173 - img_file = '%s_%s.vti' % (filename, 'imagedata') 177 + img_file = '%s_%s.vti' % (filename_tmp, 'imagedata')
174 iu.Export(self.imagedata, img_file, bin=True) 178 iu.Export(self.imagedata, img_file, bin=True)
175 project['imagedata'] = {'$vti':img_file} 179 project['imagedata'] = {'$vti':img_file}
176 print project 180 print project
177 - plistlib.writePlist(project, filename + '.plist') 181 + plistlib.writePlist(project, filename_tmp + '.plist')
178 182
179 - Compress(dir_, "teste.inv3")#os.path.join("~/Desktop/","teste.inv3"))  
180 - shutil.rmtree(dir_) 183 + path = os.path.join(dir_,filename)
  184 + print path
  185 + Compress(dir_temp, path)#os.path.join("~/Desktop/","teste.inv3"))
  186 + shutil.rmtree(dir_temp)
181 187
182 def OpenPlistProject(self, filename): 188 def OpenPlistProject(self, filename):
183 filelist = Extract(filename, tempfile.gettempdir()) 189 filelist = Extract(filename, tempfile.gettempdir())