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Commit d176f8eca6ac9ecd33fa5661fcd27fadd9765dec

Authored by tfmoraes
1 parent 4893bc0a
Exists in master and in 68 other branches 3d_inter_style, MIPs, beta3, beta4, brush_pix, canvas_reeng, canvas_text, casmoothing_cython, clean, command-line, cython_threshold, debian_cython, editor_improvements, encoding, ff_mask, ff_mask_improv, ffill_gui, ffill_segmentation, fill_holes_auto, fixes_pre_beta5, floodfill, get_pixel, import_mesh, interactor_style, inv3.0.1, invesalius-libift, mactoolbar, mactoolbar_bkp, manual_v3.1, mask_boolean_op, mask_boolean_op_bkp, mask_copy, mask_greatest_component, measure, measure_canvas, measure_improvements, measure_placement_test, measure_spacing, orientation, phoenix, region_growing_confidence, remote, remove_local_wxpython, rmatsuda-fix_ref_MTC, rmatsuda-fix_remove_marker_bug, rmatsuda-trigger_bug_fix, rotvol, segmentation_menu, select_part, smoothing_bin, smoothing_bin_pll, surface_area, threshold_history, user_guide_en, usp-navegador, vti, vtk6, watershed, watershed_improvements, watershed_improvements_bkp, watershed_merge, workdir, wwwlgui, wx2.9_mac, wxgtk3, wxgtk3_b5, wxgtk3_bkp, xmartlabs-command-line

ENH: Using nibabel instead of nipy, niby doesn't compile in windows

Showing 1 changed file with 2 additions and 2 deletions   Show diff stats
invesalius/reader/analyze_reader.py
  Diff comments   View file @d176f8e
@@ -23,7 +23,7 @@ import tempfile @@ -23,7 +23,7 @@ import tempfile
23 23
24 import vtk 24 import vtk
25 25
26 -from nipy.io.imageformats import AnalyzeHeader 26 +from nibabel import AnalyzeHeader
27 27
28 def ReadAnalyze(filename): 28 def ReadAnalyze(filename):
29 print "Reading analyze file:", filename 29 print "Reading analyze file:", filename
@@ -32,7 +32,7 @@ def ReadAnalyze(filename): @@ -32,7 +32,7 @@ def ReadAnalyze(filename):
32 header_file = open(filename) 32 header_file = open(filename)
33 header = AnalyzeHeader.from_fileobj(header_file) 33 header = AnalyzeHeader.from_fileobj(header_file)
34 xf, yf, zf = header.get_data_shape()[:3] 34 xf, yf, zf = header.get_data_shape()[:3]
35 - data_type = header.get_datatype() 35 + data_type = header.get_data_dtype().name
36 pixel_spacing = header.get_zooms()[:3] 36 pixel_spacing = header.get_zooms()[:3]
37 37
38 # Mapping from numpy type to vtk type. 38 # Mapping from numpy type to vtk type.